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  • Spatial Screening for Environmental Pool Management Opportunities

    Abstract: US Army Corps of Engineers (USACE) reservoir projects significantly alter river ecosystem structure and function. Each project adheres to a defined set of operating rules to achieve primary objectives, which typically include flood risk management, hydropower, or navigation along with ancillary objectives for drinking water/irrigation, recreation, and natural resources management. Environmental flows (E-Flows) planning under the Sustainable Rivers Program has demonstrated new opportunities for environmental pool management (EPM; Theiling et al. 2021a, 2021b) that have no negative impact on other reservoir functions. In some locations, water level drivers can be managed to improve ecological outcomes, like wetlands, waterbirds, reptiles, and water quality, by altering the magnitude, timing, frequency, and duration of pool level changes that affect riparian and shoreline plant communities. Reservoirs with large delta areas may provide particularly important wetland or riparian habitat management along avian migratory pathways or in wildlife conservation regions (Johnson 2002). These large deltas can be identified and characterized using available satellite imagery, which along with water level habitat drivers available in hydrology databases, can be used to identify USACE reservoirs with good potential for EPM. A spatial analysis of USACE reservoirs capable to support EPM can be developed utilizing estimates of water occurrence, transition, and seasonality as well as surface elevation data derived from satellite imagery to assess geomorphology drivers. USACE water management records can be used to assess wetland drivers. Nationwide screening will be broken down into ecoregions to establish the anticipated geographic range of variation for wetland and riparian habitat drivers. Southwestern US reservoirs, for example, will have much different hydrology and fauna than Midwest and Eastern US reservoirs.
  • During Nearshore Event Vegetation Gradation (DUNEVEG): Geospatial Tools for Automating Remote Vegetation Extraction

    Abstract: Monitoring and modeling of coastal vegetation and ecosystems are major challenges, especially when considering environmental response to hazards, disturbances, and management activities. Remote sensing applications can provide alternatives and complementary approaches to the often costly and laborious field-based collection methods traditionally used for coastal ecosystem monitoring. New and improved sensors and data analysis techniques have become available, making remote sensing applications attractive for evaluation and potential use in monitoring coastal vegetation properties and ecosystem conditions and changes. This study involves the extraction of vegetation metrics from airborne lidar and hyperspectral imagery (HSI) collected by the US Army Corps of Engineers (USACE) National Coastal Mapping Program (NCMP) to quantify coastal dune vegetation characteristics. A custom geoprocessing toolbox and associated suite of tools were developed to allow inputs of common NCMP lidar and imagery products to help automate the workflow for extracting prioritized dune vegetation metrics in an efficient and repeatable way. This study advances existing coastal ecosystem knowledge and remote sensing techniques by developing new methodologies to classify, quantify, and estimate critical coastal vegetation metrics which will ultimately improve future estimates and predictions of nearshore dynamics and impacts from disturbance events.
  • Three-Dimensional Geospatial Product Generation from Tactical Sources, Co-Registration Assessment, and Considerations

    Abstract: According to Army Multi-Domain Operations (MDO) doctrine, generating timely, accurate, and exploitable geospatial products from tactical platforms is a critical capability to meet threats. The US Army Corps of Engineers, Engineer Research and Development Center, Geospatial Research Laboratory (ERDC-GRL) is carrying out 6.2 research to facilitate the creation of three-dimensional (3D) products from tactical sensors to include full-motion video, framing cameras, and sensors integrated on small Unmanned Aerial Systems (sUAS). This report describes an ERDC-GRL processing pipeline comprising custom code, open-source software, and commercial off-the-shelf (COTS) tools to geospatially rectify tactical imagery to authoritative foundation sources. Four datasets from different sensors and locations were processed against National Geospatial-Intelligence Agency–supplied foundation data. Results showed that the co-registration of tactical drone data to reference foundation varied from 0.34 m to 0.75 m, exceeding the accuracy objective of 1 m described in briefings presented to Army Futures Command (AFC) and the Assistant Security of the Army for Acquisition, Logistics and Technology (ASA(ALT)). A discussion summarizes the results, describes steps to address processing gaps, and considers future efforts to optimize the pipeline for generation of geospatial data for specific end-user devices and tactical applications.
  • Snow-Covered Region Improvements to a Support Vector Machine-Based Semi-Automated Land Cover Mapping Decision Support Tool

    Abstract: This work builds on the original semi-automated land cover mapping algorithm and quantifies improvements to class accuracy, analyzes the results, and conducts a more in-depth accuracy assessment in conjunction with test sites and the National Land Cover Database (NLCD). This algorithm uses support vector machines trained on data collected across the continental United States to generate a pre-trained model for inclusion into a decision support tool within ArcGIS Pro. Version 2 includes an additional snow cover class and accounts for snow cover effects within the other land cover classes. Overall accuracy across the continental United States for Version 2 is 75% on snow-covered pixels and 69% on snow-free pixels, versus 16% and 66% for Version 1. However, combining the “crop” and “low vegetation” classes improves these values to 86% for snow and 83% for snow-free, compared to 19% and 83% for Version 1. This merging is justified by their spectral similarity, the difference between crop and low vegetation falling closer to land use than land cover. The Version 2 tool is built into a Python-based ArcGIS toolbox, allowing users to leverage the pre-trained model—along with image splitting and parallel processing techniques—for their land cover type map generation needs.
  • waterquality for ArcGIS Pro Toolbox: User’s Guide

    Abstract: Monitoring water quality of small inland lakes and reservoirs is a critical component of the US Army Corps of Engineers (USACE) water quality management plans. However, limited resources for traditional field-based monitoring of numerous lakes and reservoirs covering vast geographic areas often leads to reactional responses to harmful algal bloom (HAB) outbreaks. Satellite remote sensing methodologies using HAB indicators is a good low-cost option to traditional methods and has been proven to maximize and complement current field-based approaches while providing a synoptic view of water quality (Beck et al. 2016; Beck et al. 2017; Beck et al. 2019; Johansen et al. 2019; Mishra et al. 2019; Stumpf and Tomlinson 2007; Wang et al. 2020; Xu et al. 2019; Reif 2011). To assist USACE water quality management, we developed an Environmental Systems Research Institute (ESRI) ArcGIS Pro desktop software toolbox (waterquality for ArcGIS Pro) founded on the design and research established in the waterquality R software package (Johansen et al. 2019; Johansen 2020). The toolbox enables the detection, monitoring, and quantification of HAB indicators (chlorophyll-a, phycocyanin, and turbidity) using Sentinel-2 satellite imagery. Four tools are available: (1) automating the download of Sentinel-2 Level-2A imagery, (2) creating stacked image with options for cloud and non-water features masks, (3) applying water quality algorithms to generate relative estimations of one to three water quality parameters (chlorophyll-a, phycocyanin, and turbidity), and (4) creating linear regression graphs and statistics comparing in situ data (from field-based water sampling) to relative estimation data. This document serves as a user’s guide for the waterquality for ArcGIS Pro toolbox and includes instructions on toolbox installation and descriptions of each tool’s inputs, outputs, and troubleshooting guidance.
  • Evaluation of Automated Feature Extraction Algorithms Using High-resolution Satellite Imagery Across a Rural-urban Gradient in Two Unique Cities in Developing Countries

    Abstract: Feature extraction algorithms are routinely leveraged to extract building footprints and road networks into vector format. When used in conjunction with high resolution remotely sensed imagery, machine learning enables the automation of such feature extraction workflows. However, many of the feature extraction algorithms currently available have not been thoroughly evaluated in a scientific manner within complex terrain such as the cities of developing countries. This report details the performance of three automated feature extraction (AFE) datasets: Ecopia, Tier 1, and Tier 2, at extracting building footprints and roads from high resolution satellite imagery as compared to manual digitization of the same areas. To avoid environmental bias, this assessment was done in two different regions of the world: Maracay, Venezuela and Niamey, Niger. High, medium, and low urban density sites are compared between regions. We quantify the accuracy of the data and time needed to correct the three AFE datasets against hand digitized reference data across ninety tiles in each city, selected by stratified random sampling. Within each tile, the reference data was compared against the three AFE datasets, both before and after analyst editing, using the accuracy assessment metrics of Intersection over Union and F1 Score for buildings and roads, as well as Average Path Length Similarity (APLS) to measure road network connectivity. It was found that of the three AFE tested, the Ecopia data most frequently outperformed the other AFE in accuracy and reduced the time needed for editing.
  • Using Unmanned Aircraft System (UAS) and Satellite Imagery to Map Aquatic and Terrestrial Vegetation

    Purpose: The purpose of this study is to demonstrate the application potential of using unmanned aerial systems (UAS) combined with a time series of moderately high-resolution satellite imagery for mapping ecological restoration progress and resulting land cover changes. This technical note addresses a project under the US Army Corps of Engineers Ecosystem Management and Restoration Research Project (EMRRP) focusing on image acquisition and assessment, digital image processing techniques, analytical methodology, geospatial product development, and documentation of best practice for future data acquisition and analysis in support of ecological management efforts.
  • PUBLICATION NOTICE: Use of Convolutional Neural Networks for Semantic Image Segmentation Across Different Computing Systems

    ABSTRACT: The advent of powerful computing platforms coupled with deep learning architectures have resulted in novel approaches to tackle many traditional computer vision problems in order to automate the interpretation of large and complex geospatial data. Such tasks are particularly important as data are widely available and UAS are increasingly being used. This document presents a workflow that leverages the use of CNNs and GPUs to automate pixel-wise segmentation of UAS imagery for faster image processing. GPU-based computing and parallelization is explored on multi-core GPUs to reduce development time, mitigate the need for extensive model training, and facilitate exploitation of mission critical information. VGG-16 model training times are compared among different systems (single, virtual, multi-GPUs) to investigate each platform’s capabilities. CNN results show a precision accuracy of 88% when applied to ground truth data. Coupling the VGG-16 model with GPU-accelerated processing and parallelizing across multiple GPUs decreases model training time while preserving accuracy. This signifies that GPU memory and cores available within a system are critical components in terms of preprocessing and processing speed. This workflow can be leveraged for future segmentation efforts, serve as a baseline to benchmark future CNN, and efficiently support critical image processing tasks for the Military.